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Water as a Solvent: Properties and Biological Significance, Study notes of Biochemistry

The crucial role of water as the medium for life, highlighting its unique properties that support biological processes. It details how water's structure, dictated by the octet rule and resulting in a distorted tetrahedron geometry, leads to its dipole moment and ability to form hydrogen bonds. These hydrogen bonds are essential for water's solvent capabilities, allowing it to dissolve charged and polar substances while excluding nonpolar ones. The document further explains how water's properties influence the structure and function of proteins, nucleic acids, and membranes, as well as its involvement in various biochemical interactions, such as enzyme-substrate binding and mrna-trna matching. It also touches on the cooperative effect of hydrogen bonding, which contributes to water's high boiling point, melting point, and surface tension, making it an indispensable component of biological systems. The document also shows some chemical structures.

Typology: Study notes

2022/2023

Available from 05/23/2025

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bg1
Water
is
the
medium
for
life
Life
evolved
in
water
due
to
the
protection
it
provides
from
g.
+
UV
light
;
Organisms
typically
contain
70
-
90
%
Water
;
chemical
reactions
occur
in
aqueous
environments
;
Water
is
a
critical
determinant
of
the
structure
and
function
of
Proteins
,
nucleic
acids
,
and
membrane
The
octect
rule
dictates
that
there
are
4
electron
pairs
around
an
oxygen
atom
in
water
~
*É÷%:÷÷☒¥󲰜*󲰛
.
B@
These
electrons
are
in
four
Sp
>
orbitals
Two
of
these
pairs
covalently
link
two
hydrogen
atoms
to
a
central
oxygen
atom
g-
g-
The
two
remaining
pairs
are
non
bonding
8-1
(
lone
pairs
)
water
geometry
is
a
distorted
-
A
tetrahedron
/
Dipole
Moment
qqÉ⑨¥É§gzq
;r
The
electronegativity
a-
+
ne
oxygen
atom
induces
a
net
dipole
moment
Because
of
the
dipole
moment
,
water
can
serve
as
both
a
hydrogen
bond
donor
and
acceptor
pf3

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Water is the^ medium^ for^ life

Life evolved^ in^ water^ due^ to^ the^ protection^ it^ provides^ from

g.

UV light; Organisms typically contain^70 -^90 % Water;

chemical reactions^ occur^ in^ aqueous environments^ ; Water is a critical determinant^ of^ the^ structure^ and^ function^ of Proteins,nucleic acids^ , and^ membrane The (^) octect rule dictates^ that^ there^ are^4 electron pairs around^ an^ oxygen atom^ in^ water^ ~

*É÷%:÷÷☒¥ *

. B@ These electrons are^ in^ four^ Sp

(^) orbitals Two of these (^) pairs (^) covalently link two^ hydrogen (^) •^ •

atoms to^ a central oxygen atom

  • • g- g- The two (^) remaining pairs are^ nonbonding (lone^ pairs)^ 8- water (^) geometry is^ a^ distorted
  • (^) A (^) tetrahedron / Dipole Moment

qqÉ⑨¥É§①gzq;r

The (^) electronegativity a-+ne^ oxygen atom induces^ a^ net^ dipole^ moment Because (^) of the (^) dipole moment,water can^ serve as both^ a (^) hydrogen bond^ donor^ and^ acceptor

Hydrogen Bonds R

1 Hydrogen bonds are strong dipole - dipole

1 Or^ charge -^ dipole^ interactions^ that^ arise [ strong hydrogen

~ bond^ between^ a^ covalently bound^ hydrogen and^ lone pair of^ electrons p 1 Typically involve (^2) electronegative % ^ Weaker atoms^ ;frequently^ nitrogen^ and (^) oxygen p

hydrogen bond Hydrogen bonds (^) are (^) strongest when^ the bonded molecules^ allow for^ linear 3 atoms involved (^) are (^) bonding patterns EE•÷••:•.¥• in a^ line k⑨qg%a B-ioBIFH.as.IM#I*qi-iEBEM water can serve^ as an H^ donor^ and ④⑧%•¥•q;É¥¥

an H^ acceptor

§q•i¥§•?% " *÷←¥É•••%¥a÷ Hydrogen bonding^ in^ water •_•^ :•μ is (^) cooperative (^) up to 4 H- (^) bonds (^) per water molecule give water^ its cooperative effect^

Increases donor^ strength^ High boiling^ point;^ high^ melting

of (^) a (^) hydrogen-bond^ If^ it point and^ Large surface concurrently acts^ as^

an tension

acceptor for^ a^ 2nd^ hydrogen^ H-bonds between (^) neighboring molecules bond (^) are weak C.20k) 1m01) relative to^ the^ H

  • O covalent bonds^ (^420 Kj^ 1m01^ )