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Microbiology Laboratory Report, Lab Reports of Microbiology

It is proposed by Dr. Riqing Yu in spring 2016

Typology: Lab Reports

2020/2021

Uploaded on 05/11/2021

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Microbiology Laboratory BIOL 4101.001
Section 001: Tue, 4:00 – 6:50 pm Lab: BEP 132
Dr. Riqing Yu Office: HPR 118 Spring 2016
Laboratory description: In this lab course, you will learn basic microbiological laboratory skills in
culturing, isolation, and identification of bacteria (culture-based) from environmental or human samples.
After isolating the novel bacterial strains, you will have chance to practice a series of microbial
molecular biological techniques, including genomic DNA extraction, 16S rRNA gene amplification by
PCR, gel electrophoresis, DNA purification and sequencing, gene blasting and phylogenetic
/bioinformatic analysis. This lab will also provide training in enzyme activities and antibiotic disk assay.
Laboratory objectives: To learn basic microbial techniques and procedures that will benefit your future
studies or jobs in biomedical, industrial, environmental, and education careers; To learn how to design
and carry out novel microbial and environmental experiments; To learn how to write a scientific
laboratory report.
Lab manual: This Microbiology Laboratory Manual is optimally designed for use of students who are
concurrently taking a lecture class in Microbiology. A lab manual will be provided in the first week in
the lab upon purchase.
Grading: Each lab report or assignment will be 100 points-based (10% of the total score). Final grades
will be calculated as follows.
BIOL 4101
Lab reports 50%
Midterm exam 20%
Lab participation and liability 10%
Final exam 20%
Final grade scale
A: 90-100%
B: 80-89%
C: 70-79%
D: 60-69%
F: <59%
There will be no make-up labs. If you miss two or more labs without pre-notice and legitimate
absence reasons, 15% of total points will be deducted from your overall lab grade.
Lab reports: Each lab report will generally be 3-5 pages long and include graphs and/or tables. The
report will be in a simplified format of a journal article (Introduction, Materials & Methods, Results,
Discussion, and References Cited). Five labs will be designated for the report write-ups and will be due
a week after completion of the lab(s). You will need to turn in the lab report printout before the start of
next lab.
Cleanup as the lab liability: Before leaving the lab, you have the liability to clean up what you have
done, put away all waste, rinse any used glassware, disinfect unwanted cultures and the lab bench, etc.
Those are part of your experiment. Do not leave a mess, and do not expect someone else to clean up
after you. Leaving a mess will cause loss of your liability points.
Protection and safety:
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Microbiology Laboratory BIOL 4101.

Section 001: Tue, 4:00 – 6:50 pm Lab: BEP 132

Dr. Riqing Yu Office: HPR 118 Spring 2016

Laboratory description: In this lab course, you will learn basic microbiological laboratory skills in

culturing, isolation, and identification of bacteria (culture-based) from environmental or human samples.

After isolating the novel bacterial strains, you will have chance to practice a series of microbial

molecular biological techniques, including genomic DNA extraction, 16S rRNA gene amplification by

PCR, gel electrophoresis, DNA purification and sequencing, gene blasting and phylogenetic

/bioinformatic analysis. This lab will also provide training in enzyme activities and antibiotic disk assay.

Laboratory objectives: To learn basic microbial techniques and procedures that will benefit your future

studies or jobs in biomedical, industrial, environmental, and education careers; To learn how to design

and carry out novel microbial and environmental experiments; To learn how to write a scientific

laboratory report.

Lab manual: This Microbiology Laboratory Manual is optimally designed for use of students who are

concurrently taking a lecture class in Microbiology. A lab manual will be provided in the first week in

the lab upon purchase.

Grading: Each lab report or assignment will be 100 points-based (10% of the total score). Final grades

will be calculated as follows.

BIOL 4101

Lab reports 50%

Midterm exam 20%

Lab participation and liability 10%

Final exam 20%

Final grade scale

A: 90-100% B: 80-89% C: 70-79% D: 60-69% F: <59%

There will be no make-up labs. If you miss two or more labs without pre-notice and legitimate

absence reasons, 15% of total points will be deducted from your overall lab grade.

Lab reports: Each lab report will generally be 3-5 pages long and include graphs and/or tables. The

report will be in a simplified format of a journal article (Introduction, Materials & Methods, Results,

Discussion, and References Cited). Five labs will be designated for the report write-ups and will be due

a week after completion of the lab(s). You will need to turn in the lab report printout before the start of

next lab.

Cleanup as the lab liability: Before leaving the lab, you have the liability to clean up what you have

done, put away all waste, rinse any used glassware, disinfect unwanted cultures and the lab bench, etc.

Those are part of your experiment. Do not leave a mess, and do not expect someone else to clean up

after you. Leaving a mess will cause loss of your liability points.

Protection and safety:

a. Read and understand each lab procedure before starting the lab.

b. Always wear safety goggles and gloves whenever working with chemicals, flame or anything that

may be infective. The lab will provide safety glasses and gloves.

c. Lab coats are also provided and required to wear in the experiment.

d. Treat all chemicals as potentially hazardous and dispose of waste according to instructions.

e. Eating, drinking, smoking, tobacco chewing, etc. are not allowed in the lab.

f. No wearing of shorts, skirts, loose clothing or open-toed shoes.

Section 001

Date (^) Topic Assignment details Tue Jan 19 Lab 1 Preparing a Culture Medium and Culturing Bacteria No report Tue Jan 26 Lab 2 Bacterial Strain Isolation by Using Plate Streaking No report Tue Feb (^02) Lab 3 Microscopy and Environmental Strain Isolation 2 No report Tue Feb 0 9 Lab 4 Gram Staining and Environmental Strain Isolation 3 Lab 2-4 isolation report Tue Feb 16 Lab 5 Bacterial Genomic DNA Extraction No report Tue Feb 23 Lab 6 DNA Measurement & PCR of Bacterial 16S rRNA No report Tue Mar 01 Lab 7 Gel Electrophoresis, Purification of 16S rRNA Genes No report Tue Mar 08 Repeating DNA extraction, PCR or Gel Electrophoresis Lab 5-7 report Tue Mar 15 Spring Break Tue Mar 22 Midterm Exam Tue Mar 29 (^) Lab 8 Microbial Metabolism and Enzymes Lab 8 report Tue Apr 05 (^) Lab 9 Gene Analysis and Basic Bioinformatic Tools No report Tue Apr 12 (^) Lab 10 16S rRNA Gene Sequencing and Phylogenetic Analysis Lab 9-10 Phylogenetic analysis report Tue Apr 19 Lab 11 Antibiotic Disk Assay Lab 11 report Tue Apr 26 (^) Lab 12 Review Session Tue May 03 Final Exam (^1) Schedule is subject to change. Total 5 lab reports. BIOL 4101 Microbiol Lab: Permission# (Contact Maequeta)

Tentative Lab Schedule^1